Home / Current Issue / Paper 1713178
Computational Precision Medicine Through Quantum-Enhanced Molecular Modeling
Subject area: Science,Engineering and Technology · Area of research: Physical, Chemical, and Biological Sciences
Abstract
The exorbitant costs, protracted timelines, and elevated attrition rates associated with traditional drug-discovery pipelines underscore the pressing necessity for computational frameworks that can elucidate biomolecular interactions with quantum-level precision and practical scalability. This study introduces a Hybrid Quantum Classical (HQC) framework that combines quantum variational algorithms, classical molecular dynamics, and quantum-assisted machine-learning optimization into a single drug-screening workflow. It builds on the basic idea of Quantum Molecular Simulation (QMS). In the suggested design, quantum processors are used to selectively fix high-fidelity electronic interactions in reactive binding sites, while classical engines model the large-scale conformational dynamics of biomolecular environments. An adaptive quantum-machine-learning layer speeds up convergence even more by learning how structure and energy are related from quantum-refined descriptors. Benchmark tests against oncogenic targets like EGFR, BCR-ABL1, and p53 show that our method is up to 27% more accurate at converging binding energy and takes 4.3 times less time to compute than standard density-functional-theory and standalone QMS methods. The HQC framework makes quantum drug simulation possible for real-world drug discovery by reducing the limitations of current quantum hardware while keeping electronic-scale accuracy. This study demonstrates that hybrid quantum-classical modeling is a scalable and hardware-compatible approach for advancing next-generation computational drug design and precision therapeutics.
Keywords
Hybrid Quantum?Classical Computing; Quantum Molecular Simulation; Drug Discovery; Variational Quantum Eigensolver (VQE); Quantum Approximate Optimization Algorithm (QAOA); Quantum Machine Learning; QM/MM Modeling; Molecular Dynamics; Binding-Energy Prediction.
References
[1] Atalor, S. I., Ijiga, O. M., & Enyejo, J. O. (2023). Harnessing quantum molecular simulation for accelerated cancer drug screening. International Journal of Scientific Research in Multidisciplinary Studies and Technology, 2(1), 1–18. https://doi.org/10.38124/ijsrmt.v2i1.502
[2] Bartlett, R. J., & Musiał, M. (2007). Coupled-cluster theory in quantum chemistry. Reviews of Modern Physics, 79(1), 291–352. https://doi.org/10.1103/RevModPhys.79.291
[3] Biamonte, J., Wittek, P., Pancotti, N., Rebentrost, P., Wiebe, N., & Lloyd, S. (2017). Quantum machine learning. Nature, 549(7671), 195–202. https://doi.org/10.1038/nature23474
[4] Devitt, S. J. (2016). Performing quantum computing experiments in the cloud. Physical Review A, 94(3), 032329. https://doi.org/10.1103/PhysRevA.94.032329
[5] DiMasi, J. A., Grabowski, H. G., & Hansen, R. W. (2016). Innovation in the pharmaceutical industry: New estimates of R&D costs. Journal of Health Economics, 47, 20–33. https://doi.org/10.1016/j.jhealeco.2016.01.012
[6] Farhi, E., Goldstone, J., & Gutmann, S. (2014). A quantum approximate optimization algorithm. arXiv preprint. https://arxiv.org/abs/1411.4028
[7] Ghosh, S., Nie, A., An, J., & Huang, Z. (2014). Structure-based virtual screening and biological evaluation of inhibitors. Journal of Chemical Information and Modeling, 54(11), 3103–3116. https://doi.org/10.1021/ci500480q
[8] Kumar, G., Yadav, S., Mukherjee, A., & Hassija, V. (2024). Recent advances in quantum computing for drug development. IEEE Access, 12, 55671–55685. https://doi.org/10.1109/ACCESS.2024.3378129
[9] McArdle, S., Endo, S., Aspuru-Guzik, A., Benjamin, S. C., & Yuan, X. (2020). Quantum computational chemistry. Reviews of Modern Physics, 92(1), 015003. https://doi.org/10.1103/RevModPhys.92.015003
[10] Mittelstadt, B. D., Allo, P., Taddeo, M., Wachter, S., & Floridi, L. (2016). The ethics of algorithms: Mapping the debate. Big Data & Society, 3(2), 1–21. https://doi.org/10.1177/2053951716679679
[11] Paul, S. M., Mytelka, D. S., Dunwiddie, C. T., Persinger, C. C., Munos, B. H., Lindborg, S. R., & Schacht, A. L. (2010). How to improve R&D productivity: The pharmaceutical industry’s grand challenge. Nature Reviews Drug Discovery, 9(3), 203–214. https://doi.org/10.1038/nrd3078
[12] Preskill, J. (2018). Quantum computing in the NISQ era and beyond. Quantum, 2, 79. https://doi.org/10.22331/q-2018-08-06-79
[13] Reiher, M., Wiebe, N., Svore, K. M., Wecker, D., & Troyer, M. (2017). Elucidating reaction mechanisms on quantum computers. Proceedings of the National Academy of Sciences, 114(29), 7555–7560. https://doi.org/10.1073/pnas.1619152114
[14] Schuld, M., Sinayskiy, I., & Petruccione, F. (2015). An introduction to quantum machine learning. Contemporary Physics, 56(2), 172–185. https://doi.org/10.1080/00107514.2014.964942
[15] Senn, H. M., & Thiel, W. (2009). QM/MM methods for biomolecular systems. Angewandte Chemie International Edition, 48(7), 1198–1229. https://doi.org/10.1002/anie.200802019
[16] Warshel, A., & Levitt, M. (1976). Theoretical studies of enzymic reactions: Dielectric, electrostatic and steric stabilization of the carbonium ion. Journal of Molecular Biology, 103(2), 227–249. https://doi.org/10.1016/0022-2836(76)90311-9
How to cite this paper
@article{1713178,
author = {Chidi Ijeoma Nosiri, Paul Okoli, Echerou Leonard Nnadi, Shatange Dorothy Dooshima, Omaka Amblessed Chioma},
title = {Computational Precision Medicine Through Quantum-Enhanced Molecular Modeling},
journal = {Iconic Research And Engineering Journals},
year = {2023},
volume = {7},
number = {1},
pages = {780-786},
issn = {2456-8880},
url = {https://www.irejournals.com/formatedpaper/1713178.pdf},
abstract = {The exorbitant costs, protracted timelines, and elevated attrition rates associated with traditional drug-discovery pipelines underscore the pressing necessity for computational frameworks that can elucidate biomolecular interactions with quantum-level precision and practical scalability. This study introduces a Hybrid Quantum Classical (HQC) framework that combines quantum variational algorithms, classical molecular dynamics, and quantum-assisted machine-learning optimization into a single drug-screening workflow. It builds on the basic idea of Quantum Molecular Simulation (QMS). In the suggested design, quantum processors are used to selectively fix high-fidelity electronic interactions in reactive binding sites, while classical engines model the large-scale conformational dynamics of biomolecular environments. An adaptive quantum-machine-learning layer speeds up convergence even more by learning how structure and energy are related from quantum-refined descriptors. Benchmark tests against oncogenic targets like EGFR, BCR-ABL1, and p53 show that our method is up to 27% more accurate at converging binding energy and takes 4.3 times less time to compute than standard density-functional-theory and standalone QMS methods. The HQC framework makes quantum drug simulation possible for real-world drug discovery by reducing the limitations of current quantum hardware while keeping electronic-scale accuracy. This study demonstrates that hybrid quantum-classical modeling is a scalable and hardware-compatible approach for advancing next-generation computational drug design and precision therapeutics.},
keywords = {Hybrid Quantum?Classical Computing; Quantum Molecular Simulation; Drug Discovery; Variational Quantum Eigensolver (VQE); Quantum Approximate Optimization Algorithm (QAOA); Quantum Machine Learning; QM/MM Modeling; Molecular Dynamics; Binding-Energy Prediction.},
month = {July},
doi = {https://doi.org/10.64388/IREV7I1-1713178}
}